Difference between revisions of "Ice Core Wiki"

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= The U.S. Ice Drilling Program Ice Core Working Group (IDP-ICWG) =
 +
* [https://icedrill.org/meetings/ice-core-science-community-planning-workshop-2020 The U.S. Ice Drilling Program a community planning workshop]
 +
* [https://icedrill.org/long-range-science-plan U.S. Ice Drilling Program Long Range Science Plan]
 +
* [https://icedrill.org/about/science-advisory-board/working-groups ICWG Documents]
 +
 +
= Why Drill Ice cores =
 +
* [http://www.antarcticglaciers.org/glaciers-and-climate/ice-cores/ice-core-basics/ Ice core basics]
 +
* [https://www.youtube.com/watch?time_continue=15&v=4_Lk0XmVPV8 Roosevelt Island Ice Core Drilling]
 +
* [https://earthobservatory.nasa.gov/features/Paleoclimatology_IceCores Paleoclimatology: The Ice Core Record]
  
 
= Why share research data =
 
= Why share research data =
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** Protocols
 
** Protocols
 
** Methods
 
** Methods
 +
 +
=Open Source data portal platforms=
 +
* [https://ckan.org CKAN] data portal platform
 +
* [https://cassandra.apache.org] Apache Cassandra project
 +
* [https://zenodo.org] Zenodo
 +
 +
= Standards for paleoclimate data =
 +
 +
* See [[https://doi.org/10.1029/2019PA003632]] PaCTS 1.0: A Crowdsourced Reporting Standard for Paleoclimate Data
 +
* See also [[http://pastglobalchanges.org/news/all-news-items/9-latest-news/2333]] PaCTS, PAGES and paleodata
 +
* [[http://pastglobalchanges.org/science/wg/2k-network/partner-projects/linked-earth]] LinkedEarth
 +
* [[http://wiki.linked.earth/Main_Page]] LinkedEarth Wiki
 +
* [[http://lipd.net]] Linked Paleo Data
 +
* [[https://schema.org]] Schema.org
 +
* [[https://www.earthcube.org/p418]] Project 418
 +
* [[http://www.geosamples.org/]] SEASAR
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* [[https://www.ncdc.noaa.gov/data-access/paleoclimatology-data/past-thesaurus]] PaST (Paleoenvironmental Standard Terms) Thesaurus
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* [[http://opencoredata.org]] Open Core Data
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 +
== Ice core certificates and data templates ==
 +
 +
=== [[Ice core point or location]] ===
 +
 +
=== [[Ice core borehole measurements]] ===
 +
=== [[Ice core samples]] ===
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=== [[Ice core measurements]] ===
 +
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= Ice core data products =
 +
* temperature
 +
* dust
 +
* sea ice
 +
* volcanism
  
 
= Ice core sites and data =
 
= Ice core sites and data =
[[Ice Core Data]] and drill sites
 
  
= Ice core field data =
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*[http://icereader.org IceReader]
 +
*[https://en.wikipedia.org/wiki/List_of_ice_cores List of ice cores From Wikipedia]
 +
*[https://en.wikiversity.org/wiki/Geochronology/Ice_cores Wikiversity Page]
 +
*[https://gcmd.nasa.gov/ GCMD NASA]
 +
 
 +
[[Ice Core Data]] and drill [https://en.wikipedia.org/wiki/List_of_ice_cores  sites]
  
* WAIS Divide
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= Drilling fluid =
** Borehole logging
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* [https://doi.org/10.3189/2014AoG68A043 Sheldon et al., (2014) Annals of Glacilogy: v 55(68): 260-270.]
* SPICE core
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* [http://icedrill.org/Documents/Download.pm?DOCUMENT_ID=50 ice drilling Library]
** [http://www.usap-dc.org/view/dataset/609515 Borehole logging]
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* [https://icedrill.org/library/estisol-140-drilling-fluid Estisol 140 Drilling Fluid]
 +
 
 +
= Ice core logging protocols =
 +
* [[Core Logging procedures]]  Developed for WAIS Divide and SPICEcore by T.J. Fudge
 +
* [[Brittle Ice Handling Procedure]]  Developed for WAIS Divide and SPICEcore by T.J. Fudge
 +
== Borehole logging ==
 +
===  SPICE core ===
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**** [http://www.usap-dc.org/view/dataset/609515 Borehole logging]
 +
*** SDMA
 +
**** [https://doi.org/10.1017/jog.2016.105 Chan et al., 2017\
  
 
= NSF Ice Core Facilities =
 
= NSF Ice Core Facilities =
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= Ice core sample decontamination methods =
 
= Ice core sample decontamination methods =
  
 +
* Ice chemistry
 +
** [https://digitalcommons.library.umaine.edu/cgi/viewcontent.cgi?article=1187&context=ers_facpub  Mayewski et al., 1983]
  
 
= Ice core sampling methods =
 
= Ice core sampling methods =
* Cutting  
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* Cutting
*  Discrete melting  (G-melter GISP2)  
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** [https://isolab.ess.washington.edu/SOPs/inca-bandsaw.php Inca bandsaw]
** Discrete Continuous flow melting
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*  Discrete melting   
 +
** Discrete melting (G-melter GISP2)  
 +
** [https://pubs.acs.org/doi/abs/10.1021/es9907055 Röthlisberger  et al., 2000]
 +
** [https://pubs.acs.org/doi/abs/10.1021/es052536w Osterberg et al., 2006]
 +
Continuous flow analysis technique
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**[https://pubs.acs.org/doi/abs/10.1021/es00051a004 Sigg et al., 1994]
 +
 
 
** Continuous flow melting coupled with ICPMS
 
** Continuous flow melting coupled with ICPMS
 +
*** [https://pubs.acs.org/doi/abs/10.1021/es011088z McConnell et al., 2002]
 +
*** [https://pubs.acs.org/doi/10.1021/acs.est.9b00199 Arienzo et al., 2019]
 +
 
** Continuous flow melting coupled with IC
 
** Continuous flow melting coupled with IC
** Continuous flow melting coupled with Isotopes
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*** [https://www.ncbi.nlm.nih.gov/pubmed/11452998 Huber et al., 2001]
 +
*** [https://www.ncbi.nlm.nih.gov/pubmed/17144308 Cole-Dai et al., 2006]
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*** [https://pubs.acs.org/doi/abs/10.1021/es200118j Bigler  et al., 2011]
 +
*** [https://pubs.acs.org/doi/pdf/10.1021/acs.analchem.5b02961 Severi et al., 2015]
 +
 
 +
** Continuous flow melting coupled with stable water isotopes
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*** [https://www.atmos-meas-tech.net/10/617/2017/ Jones et al., 2017]
 +
*** [https://doi.org/10.1017/jog.2018.19 Pyne et al., 2018]
 +
 
 
** Continuous flow melting coupled with gasses
 
** Continuous flow melting coupled with gasses
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*** [https://agupubs.onlinelibrary.wiley.com/doi/full/10.1002/2016GB005570 Rhodes et al., 2017]
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*  Continuous flow analysis,  Discrete sampling and single particle
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** [https://www.jstage.jst.go.jp/article/bgr/34/0/34_11/_article Dallmayr et al., 2016]
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** [https://doi.org/10.1021/es8007722 Kaufmann et al., 2008]
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** [https://doi.org/10.1021/acs.est.9b03886 Erhardt et al., 2019]
  
 +
* Signal dispersion
 +
** [https://www.ncbi.nlm.nih.gov/pubmed/23050603 Breton et al., 2012]
  
= Ice core methods listed by measurements =
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= Glaciochemistry of polar ice cores =  
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* [https://doi.org/10.1029/96RG03527  Legrand and Mayewski, 1997]
 
* Ice chemistry major ions
 
* Ice chemistry major ions
 +
*** [https://doi.org/10.1016/S0003-2670(00)85549-X Legrand et al., 1984]
 
** Stable water isotopes
 
** Stable water isotopes
 +
*** [http://www.iceandclimate.nbi.ku.dk/research/drill_analysing/cutting_and_analysing_ice_cores/isotope_measurement/ Centre for Ice and Climate, Neils Bohr Institute]
 
*** [https://isolab.ess.washington.edu/SOPs/ University of Washington]
 
*** [https://isolab.ess.washington.edu/SOPs/ University of Washington]
** Trace elements (ICP-MS)
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*** [https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2018JF004764 Kahle et al., 2018]
 +
*** [https://doi.org/10.5194/cp-2020-19 Renland Ice Cap]  Holocene [http://www.iceandclimate.nbi.ku.dk/data data] through 8 ka  are available with annual resolution.
 +
** Trace elements
 +
*** [https://doi.org/10.1016/0016-7037(69)90045-3 Murozumi et al., 1969]
 +
*** [https://doi.org/10.1038/353153a0 Boutron et al., 1991]
 
** Density
 
** Density
**  Gasses
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** LA ICP-MS on ice
 +
 
 +
* Biomarkers
 +
** Levoglucosan
 +
*** [https://doi.org/10.5194/cp-14-871-2018 Battistel et al., 2018]
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** BC (Black Carbon)
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*** [https://doi.org/10.1016/j.quaint.2017.03.046 Hawthorne et al., 2018]
 +
* Gasses
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** Early work
 +
*** [https://science.sciencemag.org/content/123/3186/104 Gases in Icebergs by Scholander et al., 1956]
 +
*** [https://doi.org/10.1038/284155a0 Delmas et al., 1980]
 +
*** [https://www.nature.com/articles/d41586-020-00809-8 Forty years of ice-core records of CO2]
 +
*** [https://www.sciencedirect.com/science/article/pii/S1095643300002075 See also The Irving–Scholander legacy in polar physiology by Elsner, 2000]
 +
** Atmospheric composition reconstructions
 +
*** [https://onlinelibrary.wiley.com/doi/abs/10.1002/rcm.8099 Bereiter et al., 2018]
 +
** Sea ice  reconstructions
 +
*** [https://www.mdpi.com/2076-3263/9/12/506 Thomas et al., 2019 Antarctic Sea Ice Proxies]
 +
 
 +
= Ice core data =
 +
== [http://www.iceandclimate.nbi.ku.dk/research/strat_dating/annual_layer_count/gicc05_time_scale/ Greenland Ice Core Chronology 2005 (GICC05)]==
 +
* [https://doi.org/10.1029/2005JD006921 Holocene section 0-7.9 ka b2k  Vinther et al.2006]
 +
* [https://doi.org/10.1029/2005JD006079  Early Holocene section Rasmussen et al.2006]
 +
* [ftp://ftp.ncdc.noaa.gov/pub/data/paleo/icecore/greenland/summit/ngrip/gicc05-eholocene-10yr.txt  Early Holocene section supporting data set Rasmussen et al.2006]
 +
== EGRIP (East GReenland Ice–core Project)==
 +
* [https://doi.org/10.5194/cp-2019-143 Mojtabavi et al., 2019]
 +
 
 +
== [https://nsidc.org/data/waiscores/data.html WAISCORES]==
 +
=== Siple Dome A deep ice core (SDMA) ===
 +
* Time scale
 +
** [https://nsidc.org/data/waiscores/timescale.html Final annual layer counted Nov. 2003]
 +
** References
 +
*** [https://doi.org/10.3189/172756504781829864 Taylor et al., 2004]
 +
** [ftp://sidads.colorado.edu/pub/DATASETS/AGDC/waiscores/meese/crrelvisa.dat CRREL Annual Layer Data for Siple Dome Core A].
 +
** [ftp://sidads.colorado.edu/pub/DATASETS/AGDC/waiscores/alley/sdma_years.txt PSU Annual Layer Data for Siple Dome Core A (to 646.82m))]
 +
** All of the Siple Dome data at the [https://www.usap-dc.org/search?free_text=&repo=&dp_title=&sci_program=Siple+Dome+Ice+Core&person=&award=&nsf_program= USAP-DC]
 +
 
 +
=== WAIS Divide deep ice core (WDC-06A) ===
 +
* Time scale
 +
** [https://www.usap-dc.org/view/dataset/601015 WD2014: Timescale for WAIS Divide Core 2006 A (WDC-06A)]
 +
*** [https://www.ncdc.noaa.gov/paleo-search/study/20246 Copy of WAIS Divide Deep Ice Core 0-68ka WD2014 Chronology submitted to NCDC by C.Buizert]
 +
*** [https://doi.pangaea.de/10.1594/PANGAEA.902577 Copy of WD2014 time scale submitted to PANGAEA server by M. Sigl]
 +
** References
 +
*** 31.2-68 ka B.P. [https://doi.org/10.5194/cp-11-153-2015 Buizert et al., (2015)]
 +
*** 0.2.4 ka B.P. [https://doi.org/10.1038/nature14565 Sigl et al., (2015)].
 +
*** 2.4-31.2 ka B.P. [https://doi.org/10.5194/cp-12-769-2016 Sigl et al., (2016)]
 +
* All  of the WAIS Divide data at the [https://www.usap-dc.org/search?free_text=&repo=&dp_title=&sci_program=WAIS+Divide+Ice+Core&person=&award=&nsf_program= USAP-DC]
 +
* The West Antarctic Ice Sheet (WAIS) Divide ice core project [http://www.waisdivide.unh.edu web site]
 +
 
 +
== The Roosevelt Island Ice Core (RICE) ==
 +
* The Roosevelt Island Ice Core Chronology 2017 [https://doi.pangaea.de/10.1594/PANGAEA.899571 (RICE17)]
 +
** [https://doi.org/10.5194/cp-15-751-2019 Winstrup et al., 2019]
 +
** [https://doi.org/10.5194/cp-2018-68 Lee et al. 2019]
  
= Time scale development =
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== SPICEcore SPC-14 ==
  
== Publications ==
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* Time scale SP19
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** [https://doi.org/10.15784/601206 USAP-1443336_1 data set]
 +
** References
 +
*** [https://doi.org/10.5194/cp-15-1793-2019 Winski et al., 2019]
 +
** Visual stratigraphy
 +
*** [https://erdc-library.erdc.dren.mil/xmlui/handle/11681/33378 Fegyveresi et al., 2019]
 +
* [https://www.usap-dc.org/search?free_text=&repo=&dp_title=&sci_program=SPICEcore&person=&award=&nsf_program= All SPICEcore Data]
  
 +
== Methodology ==
 +
* [https://zenodo.org/ Zenodo]
 
* [http://www.pastglobalchanges.org/download/docs/magazine/2014-1/PAGESmagazine_2014(1)_26-27_Rasmussen_et_al.pdf PAGES, Rasmussen et al., 2014]
 
* [http://www.pastglobalchanges.org/download/docs/magazine/2014-1/PAGESmagazine_2014(1)_26-27_Rasmussen_et_al.pdf PAGES, Rasmussen et al., 2014]
 
* [https://www.clim-past.net/8/1881/2012/cp-8-1881-2012.pdf Winstrup et al., 2012]
 
* [https://www.clim-past.net/8/1881/2012/cp-8-1881-2012.pdf Winstrup et al., 2012]
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* Matlab David Meeker, UNH scripts (Not available)
 
* Matlab David Meeker, UNH scripts (Not available)
 
*  Kendrick Taylor, DRI (Fortran) code (Not available)
 
*  Kendrick Taylor, DRI (Fortran) code (Not available)
*  Kenneth McGwire, DRI  (code requested)
+
*  Kenneth McGwire, DRI  (Not available)
* [http://cci.icecoredata.org/Software/icd.html Ice core dating software (ICD)]
+
* [http://www.icecoredata.org/cci/software/icd.html Ice core dating software (ICD)]
 +
* [https://icd.icecoredata.org/ New Ice core dating software (ICD)]
 
* [https://github.com/maiwinstrup/StratiCounter StratiCounter (Matlab)]
 
* [https://github.com/maiwinstrup/StratiCounter StratiCounter (Matlab)]
 
* [https://d.icecoredata.org/ Climate Data Workbench (P301)]
 
* [https://d.icecoredata.org/ Climate Data Workbench (P301)]
 
* [https://github.com/parrenin/IceChrono IceChrono 1 (Python)]
 
* [https://github.com/parrenin/IceChrono IceChrono 1 (Python)]
 
+
* [https://doi.org/10.5194/cp-2018-68  Stratigraphic matching Matlab software. See Supplement]
  
 
== Pythons books ==
 
== Pythons books ==
  
* [http://kitchingroup.cheme.cmu.edu/pycse/ pycse] - Python3 Computations in Science and Engineering  
+
* [http://kitchingroup.cheme.cmu.edu/pycse/ pycse] - Python3 Computations in Science and Engineering
  
 
+
= Paleolimate Time Series and processing software=
= Climate Time Series processing =
 
  
 
* [https://github.com/jajcayn/pyclits pyCliTS]
 
* [https://github.com/jajcayn/pyclits pyCliTS]
 
* [https://github.com/chadagreene/CDT CDT]
 
* [https://github.com/chadagreene/CDT CDT]
 +
* [https://mc-stan.org/ Stan platform]
 +
* [http://linked.earth LinkedEarth]
 +
* [https://github.com/LinkedEarth LinkedEarth software tools]
 +
* [https://github.com/LinkedEarth/Pyleoclim_util Pyleoclim]
  
 
= Sources of uncertainty in ice core data =  
 
= Sources of uncertainty in ice core data =  
  
 
* [https://www1.ncdc.noaa.gov/pub/data/paleo/icecore/ice-cores.pdf PDF] By Eric Steig
 
* [https://www1.ncdc.noaa.gov/pub/data/paleo/icecore/ice-cores.pdf PDF] By Eric Steig
 +
 +
= Climate data, timeseries, flow modeling =
 +
 +
== Climate Models and Data ==
 +
 +
* [https://climatereanalyzer.org/ Climate Reanalyzer]
 +
 +
== Sea ice (contributed by Trey Stafford, NSIDC) ==
 +
* [https://nsidc.org/data/g10010 Gridded sea ice extent and concentration, 1850 onwards]
 +
* [https://nsidc.org/arcticseaicenews Arctic sea ice news and analysis]
 +
* [https://nsidc.org/arcticseaicenews/sea-ice-tools/ Sea ice Tools & spreadsheets]
 +
* [https://nsidc.org/data/seaice_index/ Sea ice index data landing page]
 +
* [https://nsidc.org/map-services/geospatial-map-services NSIDC's map services API documentation]
 +
* [https://nsidc.org/data/masie some additional sea ice datasets available from NSIDC]
 +
 +
* [https://nsidc.org/api/mapservices/NSIDC/ows?service=WCS&version=2.0.0&request=GetCoverage&coverageId=NSIDC:g02135_concentration_raster_monthly_n&boundingbox=-3850000.0,-5350000.0,3750000.0,5850000.0,EPSG:3413&SUBSET=time("2018-01-02T00:00:00.000‌​Z")] Example Web Map Service (WMS) request for the northern hemisphere
 +
 +
== Ice flow models and tools==
 +
=== Firn Model ===
 +
* [https://github.com/UWGlaciology/CommunityFirnModel The Community Firn Model]
 +
===  Elmer/Ice ===
 +
* [http://elmerice.elmerfem.org Open Source Finite Element Software]
 +
 +
== Ice flow Modeling and Data ==
 +
* Scripts and utilities for assessing the potential for a million-year-old ice-core record from the Allan Hills Blue Ice Area [https://github.com/kehrl/allanhills by Laura Kehrl]

Revision as of 06:18, 30 May 2020

The U.S. Ice Drilling Program Ice Core Working Group (IDP-ICWG)

Why Drill Ice cores

Why share research data

  • See [Elsevier]site
  • Make scientific data FAIR [1]
  • Open Data Report: The researcher perspective
  • What is research data? While the definition often differs per field, generally, research data refers to the results of observations or experiments that validate your research findings. These span a range of useful materials associated with your research project, including:
    • Raw or processed data files
    • Software
    • Code
    • Models
    • Algorithms
    • Protocols
    • Methods

Open Source data portal platforms

  • CKAN data portal platform
  • [2] Apache Cassandra project
  • [3] Zenodo

Standards for paleoclimate data

  • See [[4]] PaCTS 1.0: A Crowdsourced Reporting Standard for Paleoclimate Data
  • See also [[5]] PaCTS, PAGES and paleodata
  • [[6]] LinkedEarth
  • [[7]] LinkedEarth Wiki
  • [[8]] Linked Paleo Data
  • [[9]] Schema.org
  • [[10]] Project 418
  • [[11]] SEASAR
  • [[12]] PaST (Paleoenvironmental Standard Terms) Thesaurus
  • [[13]] Open Core Data

Ice core certificates and data templates

Ice core point or location

Ice core borehole measurements

Ice core samples

Ice core measurements

Ice core data products

  • temperature
  • dust
  • sea ice
  • volcanism

Ice core sites and data

Ice Core Data and drill sites

Drilling fluid

Ice core logging protocols

Borehole logging

SPICE core

NSF Ice Core Facilities

  • NSF ICF
  • Example of CPL (Core Processing Line) generated files
    • Core logs
    • Images
    • ECM
    • Visible stratigraphy

Ice core sample decontamination methods

Ice core sampling methods

Glaciochemistry of polar ice cores

Ice core data

Greenland Ice Core Chronology 2005 (GICC05)

EGRIP (East GReenland Ice–core Project)

WAISCORES

Siple Dome A deep ice core (SDMA)

WAIS Divide deep ice core (WDC-06A)

The Roosevelt Island Ice Core (RICE)

SPICEcore SPC-14

Methodology

Software for developing Ice Core time scale

Pythons books

  • pycse - Python3 Computations in Science and Engineering

Paleolimate Time Series and processing software

Sources of uncertainty in ice core data

  • PDF By Eric Steig

Climate data, timeseries, flow modeling

Climate Models and Data

Sea ice (contributed by Trey Stafford, NSIDC)

Ice flow models and tools

Firn Model

Elmer/Ice

Ice flow Modeling and Data

  • Scripts and utilities for assessing the potential for a million-year-old ice-core record from the Allan Hills Blue Ice Area by Laura Kehrl